Cinema5

From Bioinformatist.com

Contents 1 Introduction 2 Package details 3 Installation 3.1 Linux 4 Running 5 Troubleshooting

Introduction

Cinema5 is sequence alignment editor by the Advanced Interfaces Group. It is available for Windows 2000/XP, Linux and Mac OS X.

Package details

* Format: Pre-compiled binary
* Source Code:
* Version: 0.2.1-beta
* License: http://aig.cs.man.ac.uk/research/utopia/cinema/licence.php
* Developer(s):
* Website: http://aig.cs.man.ac.uk/research/utopia/cinema/cinema.php
* Download: Check download section of the above website
* Requirements:
* FAQ:

Installation

Linux

1. Download the file cinema5-0.2.1-beta.tar.gz from the above location
   
2. Uncompress the archive to a folder where cinema5 will be installed (ex: programs)
   

   mkdir programs

   cd programs

   tar zxvf cinema5-0.2.1-beta.tar.gz

3. Run the installation script
   

   cd cinema5-0.2.1-beta 

   ./INSTALL.sh

4. The above step will create the executable cinema5 in the directory.
   
5. A symbolic link can be created in the user's bin directory for easy access
   

   cd ~/bin

   ln -s ~/programs/cinema5-0.2.1-beta/cinema5 cinema5

Running

Cinema5 can be run using the command cinema5 in a terminal

Troubleshooting