Genscan

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Contents

Introduction

Genscan is a program for gene prediction in Vertebrate, Maize and Arabidopsis. The program is available as a server and as a standalone program for Sun/Solaris, SGI/Irix, DEC/Tru64 and Intel/Linux.

To obtain a standalone version of the program, follow the instructions given at the end of the page [1]. If accepted, the program will be sent by email as an attachment (Filename: genscanlinux.tar.uue)

Package details


Installation

Linux

OpenSUSE

  1. The program is a tar archive in a uuencoded form (Filename: genscanlinux.tar.uue)
  2. It can be decoded with the program uudecode to give the tar archive
    uudecode genscanlinux.tar.uue
  3. Uncompress the tar archive to a global location (ex: /usr/local)

    cd /usr/local
    mkdir genscan
    cd genscan
    tar xvf /data/genscanlinux.tar
  4. Create a symbolic link for easy access

    cd /usr/local/bin
    ln -s /usr/local/genscan/genscan genscan

RedHat/Fedora

  • Same as above

Ubuntu/Debian

  • Same as above

Running

Troubleshooting

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