Modeller

From Bioinformatist.com

Contents 1 Introduction 2 Package details 3 Installation 3.1 Linux 3.1.1 OpenSUSE, RedHat/Fedora 3.1.2 Ubuntu/Debian 3.1.3 Other 3.2 Windows 4 Running 5 Troubleshooting

Introduction

MODELLER is a program for predicting the three-dimensional structure of proteins using proteins whose structure is already known i.e., from experimental techniques.
MODELLER is freely available for academic purposes. The registration for obtaining this license can be done at http://salilab.org/modeller/registration.html
MODELLER is available for a number of Operating Systems and Architectures. For UNIX and Linux, an RPM as well as a generic installer is available for download.

Package details

* Source Code: -
* Version: 9v2
* License: Academic, Commercial
* Developer(s): Andrej Sali
* Website: http://salilab.org/modeller/
* Download: http://salilab.org/modeller/9v2/release.html
* Requirements: glibc >= 2.3
* FAQ: http://salilab.org/modeller/FAQ.html

Installation

Linux

OpenSUSE, RedHat/Fedora

1. The registration for obtaining an academic license can be done at http://salilab.org/modeller/registration.html. Once accepted, a license key will be sent by email.
   
2. Download the file http://salilab.org/modeller/9v2/modeller-9v2-1.i386.rpm
   
   NOTE: If you are using a 64BIT architecture, the appropriate files have to be downloaded
   
3. Install the RPM. Here you need to specify the key which you received by email
   
   

   env KEY_MODELLER9v2="License Key"

   rpm -Uvh modeller-9v2-1.i386.rpm 

   
   

Ubuntu/Debian

 sudo env KEY_MODELLER9v3=XXXX rpm -Uvh modeller-9v3-1.i386.rpm --nodeps

Other

Windows

Running

Modeller can be run in a terminal by using the command mod9v2

Troubleshooting