T-Coffee
From Bioinformatist.com
Contents |
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Introduction
T-Coffee is a program for performing Multiple Sequence Alignment of Protein or DNA sequences.[edit]
Package details
* Format: ZIP archive* Source Code: http://www.tcoffee.org/Packages/T-COFFEE_distribution.tar.gz
* Version: 5.05
* License: GPL/Academic
* Developer(s):
* Website: http://www.tcoffee.org
* Download: http://www.tcoffee.org/Packages/T-COFFEE_distribution.tar.gz
* Requirements: ClustalW pre-installed
* FAQ:
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Installation
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Linux
- Download the file T-COFFEE_distribution.tar.gz from the download location.
- Uncompress the file to a convenient location(ex: temp)
cd temp
tar zxvf T-COFFEE_distribution.tar.gz
- This will create the directory T-COFFEE_distribution_Version_5.05. Move into this directory and configure the software
cd T-COFFEE_distribution_Version_5.05
./install
- The above step will create the t_coffee binary in the bin directory. Copy this binary into a convenient location(ex: /usr/local/bin)
cp bin/t_coffee /usr/local/bin/
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Running
T-Coffee can be run from a terminal using the command t_coffee[edit]
Troubleshooting
