T-Coffee

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Contents

Introduction

T-Coffee is a program for performing Multiple Sequence Alignment of Protein or DNA sequences.

Package details


Installation

Linux

  1. Download the file T-COFFEE_distribution.tar.gz from the download location.

  2. Uncompress the file to a convenient location(ex: temp)
    cd temp
    tar zxvf T-COFFEE_distribution.tar.gz
  3. This will create the directory T-COFFEE_distribution_Version_5.05. Move into this directory and configure the software
    cd T-COFFEE_distribution_Version_5.05
    ./install
  4. The above step will create the t_coffee binary in the bin directory. Copy this binary into a convenient location(ex: /usr/local/bin)
    cp bin/t_coffee /usr/local/bin/

Running

T-Coffee can be run from a terminal using the command t_coffee


Troubleshooting

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